# granules parameters # This value changes the number of granules that will be generated # the GCL volume is approximately 1910088333.383 (um^3) # so the number of granules filling the GCL is volume/(grid_dim^3) grid_dim = 27 #grid_dim = 25 # 122166 granules # grid_dim = 49 # 16013 granules # synapses interval on the mitral's dendrites mean_synapse_interval = 10 # synapses conductances exc_gmax = 1 # nS inh_gmax = 2e-3 # uS # sniffs parameters # random ranges for syn weights ods_wl = .7 ods_wh = 1.3 # random sniff frequency range ods_freql = 2 ods_freqh = 10 # stream sniff # you must change this to change the stimulation sequence # of tuft weights or sniffs activation times stream_ods_shift = 1 # odorsequence # for each odor you must add a tuple in this manner # the possible odors name are # 'Apple', 'Banana', 'Basil', 'Black_Pepper', # 'Cheese', 'Chocolate', 'Cinnamon', # 'Cloves', 'Coffee', 'Garlic', 'Ginger', # 'Lemongrass', 'Kiwi', 'Mint', 'Onion', # 'Oregano', 'Pear', 'Pineapple' # ('Mint', t init, t duration, rel. conc.), (...), (...) odor_sequence = [ ('Mint', 50, 20000, 6.5e-3) ] #odor_sequence = [ 'seq.txt' ] # segments to records # (cell gid, section index, arc, output filename) sec2rec = [] # sim. duration tstop = 7050 initial_weights = '' # dummy syns parameters dummy_syn_conn = '' #dummy_syn_conn = 'dummysyn-c%d-d%d.txt' % (mean_synapse_interval, grid_dim) dummy_syn_freq = 10. # sniff interval # None is random # the number was constant sniff_invl = 100