if __name__ == "__main__": import sys import os import string from neuron import * h("strdef simname, allfiles, simfiles, output_file, datestr, uname, osname, comment") h.simname=simname = "mtlhpc" h.allfiles=allfiles = "geom.hoc pyinit.py geom.py network.py params.py run.py" h.simfiles=simfiles = "pyinit.py geom.py network.py params.py run.py" h("runnum=1") runnum = 1.0 h.datestr=datestr = "11may20" h.output_file=output_file = "data/11may20.05" h.uname=uname = "x86_64" h.osname=osname="linux" h("templates_loaded=0") templates_loaded=0 h("xwindows=1.0") xwindows = 1.0 h.xopen("nrnoc.hoc") h.xopen("init.hoc") from pyinit import * from geom import * from networkmsj import * from params import * from run import * # setup washin,washout """ import run as Run Run.olmWash = [0, 1] Run.basWash = [1, 1] Run.pyrWashA = [1, 1] Run.pyrWashB = [1, 1] Run.washinT = 1e3 Run.washoutT = 2e3 Run.fiwash = h.FInitializeHandler(1,Run.setwash) """ h.tstop = 5e3 h.run() net.rasterplot() net.calc_lfp() net.pravgrates() myg = h.Graph() net.vlfp.plot(myg,h.dt) myg.exec_menu("View = plot") myg.exec_menu("New Axis")