#!/usr/bin/env python """config-file for feedforward circuit in Figure 7""" # _title_ : config_circuit.py # _author_ : Katharina Anna Wilmes # _mail_ : katha __at__ bccn-berlin.de # --Imports-- import os import gc import sys import pickle import h5py from time import time import datetime import numpy as np from NeuroTools.parameters import Parameter #param_ranges = { # 'Input': # { # 'freq': ParameterArray([10]), # 'w_ie': ParameterArray([0.0,0.05]), # }, # 'Synapse': # { # 'EPSP':ParameterArray(['apical']), # 'apical' 'varying' # 'inh_pos':ParameterArray([0.9]), # 'inh_type':ParameterArray([0]), # 0 hh2, 1 hh3 # 'interneuron_target':ParameterArray([0]) #0 proximal, 1 distal # # }, # } params = { 'visual': 'figure', 'results_file': 'pairingscenarios', 'Input': { 'freq': Parameter(10), 'w_ei': Parameter(0.3), 'w_ii':Parameter(0.0), 'w_ee':Parameter(0.02) }, 'Synapse': { 'pos': Parameter(3), 'EPSP_pos':Parameter(0.7), 'timing_sigma':Parameter(0), 'distal_weight':Parameter(0.008), 'oblique_weight':Parameter(0.001), 'basal_weight':Parameter(0.005), }, 'shunt': { 'reversal':Parameter(-73), 'shunt_pos': Parameter(2),#0 'tau1':Parameter(0.5), 'tau2':Parameter(5), 'distal_shunt_pos':Parameter(0.9), 'proximal_shunt_pos':Parameter(0.18), 'basal_shunt_pos':Parameter(0.3), 'distal_shunt_compartment':'a', 'proximal_shunt_compartment':'a', 'basal_shunt_compartment':'basal', 'shunt_pattern':'gauss', 'shunt_number':Parameter(0), 'shunt_delay':Parameter(1), 'shunt_sigma':Parameter(0.05), 'inh_type':Parameter(0), 'interneuron_target':Parameter(0), 'inh_pos':Parameter(0.9), }, 'cell': { 'gsca' : Parameter(1.5), 'git2' : Parameter(0.005), 'gbar_kca' : Parameter(2.5), }, 'sim': { 'duration' : Parameter(1,'second'), 'v_init': Parameter(-70,'mV'), 'dt': Parameter(0.1,'ms'), 'sim_time':Parameter(100,'ms'), 'celsius': Parameter(30,'C'), 'high_res': True, 'theta':Parameter(1,'1/ms') }, 'plot': { 'version':Parameter(1), 'path': os.path.expanduser("/scratch/kwilmes/Project1") } }