#!/usr/bin/env python """config-file for traces of Figure 4A""" # _title_ : config_traces_bAP.py # _author_ : Katharina Anna Wilmes # _mail_ : katha __at__ bccn-berlin.de # --Imports-- import os import gc import sys import pickle import h5py from time import time import numpy as np import datetime from NeuroTools.parameters import Parameter #param_ranges = { # 'Input': # { # 'freq': ParameterArray([10]), # 'wee':ParameterArray([0.008]), # }, # 'Synapse': # { # 'scen': ParameterArray([3]), # 'shunt_pos':ParameterArray([0,1,2,3]) # } # # } params = { 'visual': 'figure', 'results_file': 'pairingscenarios', 'Input': { 'freq': Parameter(10), 'wee':Parameter(0.008), #0.002 'wee_strong':Parameter(0.014) #0.002 }, 'Synapse': { 'scen': Parameter(1), 'pos': Parameter(3), 'distal_weight':Parameter(0.00001), #0.01 'oblique_weight':Parameter(0.00001), 'basal_weight':Parameter(0.00001), 'syn_type':'additive', 'interneuron_frequency': Parameter(75.0), 'interneuron_reps': Parameter(1), }, 'shunt': { 'reversal':Parameter(-73), 'shunt_pos': Parameter(0), 'tau1':Parameter(0.5), 'tau2':Parameter(5), 'basal_shunt_delay':Parameter(1.5), 'shunt_delay':Parameter(1.5), 'distal_shunt_weight':Parameter(0.05), 'proximal_shunt_weight':Parameter(0.05), 'basal_shunt_weight':Parameter(0.05), 'distal_shunt_pos':Parameter(0.9), 'proximal_shunt_pos':Parameter(0.18), 'basal_shunt_pos':Parameter(0.3), 'distal_shunt_compartment':'a', 'proximal_shunt_compartment':'a', 'basal_shunt_compartment':'basal', }, 'STDP': { 'delta_t': Parameter(4,'ms'), 'thresh' : Parameter(-30, 'mV'), 'ca_thresh' : Parameter(0.5, 'mM') }, 'cell': { 'gsca' : Parameter(1.5), 'git2' : Parameter(0.005), 'gbar_kca' : Parameter(2.5), }, 'sim': { 'duration' : Parameter(1,'second'), 'v_init': Parameter(-70,'mV'), 'dt': Parameter(0.1,'ms'), 'sim_time':Parameter(100,'ms'), 'celsius': Parameter(30,'C'), 'high_res': True, 'theta':Parameter(1,'1/ms') }, 'plot': { 'version':Parameter(1), 'path': os.path.expanduser("/scratch/kwilmes/Project1") } }