""" /***********************************************************************************************************\ This Python script is parameters parser for EnergyChaser.pyx library associated with paper: Ruben Tikidji-Hamburyan , Tarek El-Ghazawi , Jason Triplett Novel Models of Visual Topographic Map Alignment into Superior Colliculus Copyright: Ruben Tikidji-Hamburyan Apr.2016 - Sep.2016 \************************************************************************************************************/ """ import os,sys,csv from numpy import * from numpy import random as rnd #from multiprocs import multiprocs as mps import subprocess as sbp try: import cPickle as pkl except: import pickle as pkl import time import pyximport; pyximport.install() from EnergyChaser import chaser ########## DEFAULTs HERE ########## #Size xsize, ysize = 100, 100 #Chemistri Aaf, Baf = 60., 90. #Activity Bca, Gca = 11., 20. Rca, Vca, Sca = 5., 3.,1. A2Pca = 0.625 #Competition Apr, Bpr, Dpr = 5., 1., 1. E12 = 1e5 Nstep = 150 #number steps per neuron ParentDir = "" #Flags Knocked = False Report = False TotalEnergy = False Init = True StartRec = False StopRec = True Indicator = False Graphs = False Log = True RunDB = True Model = 3 #"ScaledCor" #"Correlation" or "V1Int" Norm = True ModelID = time.strftime("%Y%m%d%H%M%S")+"%03d"%rnd.randint(1000) ################################## if __name__ == "__main__": for arg in sys.argv[1:]: if arg[0] != "/": continue if not "="in arg[1:] : continue print "Applay: ",arg[1:], try: exec arg[1:] except: sys.stderr.write("ERROR in parameter {}\n\n".format(arg)) print " Done" if type(Model) is str: if Model == "ScaledCor" : Model = 2 elif Model == "Correlation" : Model = 1 elif Model == "V1Int" : Model = 3 elif Model == "V1Int-D" : Model = 4 else : Model = 3 if Model != 1 and Model != 2 and Model != 3 and Model != 4 : Model = 3 p = chaser(xsize, ysize, Nstep, E12 = E12, Aaf = Aaf, Baf = Baf, Bca = Bca, Gca = Gca, Rca=Rca, Vca = Vca, Sca=Sca, A2Pca = A2Pca, Apr = Apr, Bpr = Bpr, Dpr = Dpr, TotalEnergy = TotalEnergy, Init = Init, StartRec = StartRec , StopRec = StopRec, Knocked = Knocked , Indicator = Indicator, Log = Log , Reporting = Report, Graphs = Graphs , RunDB = RunDB, Model = Model , Norm = Norm, ParentDir = ParentDir , timestemp = ModelID)