TITLE simple AMPA receptors COMMENT ----------------------------------------------------------------------------- Simple model for glutamate AMPA receptors ========================================= - FIRST-ORDER KINETICS, FIT TO WHOLE-CELL RECORDINGS Whole-cell recorded postsynaptic currents mediated by AMPA/Kainate receptors (Xiang et al., J. Neurophysiol. 71: 2552-2556, 1994) were used to estimate the parameters of the present model; the fit was performed using a simplex algorithm (see Destexhe et al., J. Computational Neurosci. 1: 195-230, 1994). - SHORT PULSES OF TRANSMITTER (0.3 ms, 0.5 mM) The simplified model was obtained from a detailed synaptic model that included the release of transmitter in adjacent terminals, its lateral diffusion and uptake, and its binding on postsynaptic receptors (Destexhe and Sejnowski, 1995). Short pulses of transmitter with first-order kinetics were found to be the best fast alternative to represent the more detailed models. - ANALYTIC EXPRESSION The first-order model can be solved analytically, leading to a very fast mechanism for simulating synapses, since no differential equation must be solved (see references below). References Destexhe, A., Mainen, Z.F. and Sejnowski, T.J. An efficient method for computing synaptic conductances based on a kinetic model of receptor binding Neural Computation 6: 10-14, 1994. Destexhe, A., Mainen, Z.F. and Sejnowski, T.J. Synthesis of models for excitable membranes, synaptic transmission and neuromodulation using a common kinetic formalism, Journal of Computational Neuroscience 1: 195-230, 1994. ----------------------------------------------------------------------------- ENDCOMMENT NEURON { POINT_PROCESS AMPA_S NONSPECIFIC_CURRENT i RANGE R, g, gmax, i GLOBAL Cdur_a, Alpha_a, Beta_a, Erev_a, Rinf_a, Rtau_a } UNITS { (nA) = (nanoamp) (mV) = (millivolt) (umho) = (micromho) (mM) = (milli/liter) } PARAMETER { Cdur_a = 1 (ms) : transmitter duration (rising phase) Alpha_a = 1.1 (/ms) : forward (binding) rate Beta_a = 0.19 (/ms) : backward (unbinding) rate Erev_a = 0 (mV) : reversal potential gmax } ASSIGNED { v (mV) : postsynaptic voltage i (nA) : current = g*(v - Erev) g (umho) : conductance Rinf_a : steady state channels open Rtau_a (ms) : time constant of channel binding synon } STATE {Ron Roff} INITIAL { Rinf_a = Alpha_a / (Alpha_a + Beta_a) Rtau_a = 1 / (Alpha_a + Beta_a) synon = 0 } BREAKPOINT { SOLVE release METHOD cnexp g = gmax*(Ron + Roff)*1(umho) i = g*(v - Erev_a) } DERIVATIVE release { Ron' = (synon*Rinf_a - Ron)/Rtau_a Roff' = -Beta_a*Roff } : following supports both saturation from single input and : summation from multiple inputs : if spike occurs during CDur then new off time is t + CDur : ie. transmitter concatenates but does not summate : Note: automatic initialization of all reference args to 0 except first NET_RECEIVE(weight, on, nspike, r0, t0 (ms)) { : flag is an implicit argument of NET_RECEIVE and normally 0 if (flag == 0) { : a spike, so turn on if not already in a Cdur_a pulse nspike = nspike + 1 if (!on) { r0 = r0*exp(-Beta_a*(t - t0)) t0 = t on = 1 synon = synon + weight state_discontinuity(Ron, Ron + r0) state_discontinuity(Roff, Roff - r0) } : come again in Cdur_a with flag = current value of nspike net_send(Cdur_a, nspike) } if (flag == nspike) { : if this associated with last spike then turn off r0 = weight*Rinf_a + (r0 - weight*Rinf_a)*exp(-(t - t0)/Rtau_a) t0 = t synon = synon - weight state_discontinuity(Ron, Ron - r0) state_discontinuity(Roff, Roff + r0) on = 0 } }