Calcium Calculator Simulation Script Files | ||||
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V. Matveev,
A. Sherman,
R.S. Zucker,
(2002) New and Corrected Simulations of Synaptic Facilitation Biophysical Journal 83:1368-1373. [ Full Text ] [ PDF (134 KB) ] |
STF.growth.par
- simulation script calculating the [Ca^{2+}] profiles and facilitation growth curves
for a five-pulse stimulus train (at 100 Hz), shown in Figs. 1 and 2, B-D. The facilitation decay time courses shown in Fig. 3(B-D) are computed in two stages: 1. STF.decay.stage1.par - generates the [Ca^{2+}] files corresponding to the different interspike interval values. 2. STF.decay.stage2.par - uses the [Ca^{2+}] files created at 1st stage to compute the STF decay time course. The above scripts rely on (i.e., import) the following scripts describing the model systems of PDEs and ODEs: A. quoted.pde.par - the quoted parameter set B. actual.pde.par - the actual parameter set C. modified.pde.par - the modified parameter set D. tortuosity.pde.par - the parameter set with tortuosity XY.ode.par - the script describing the [Ca^{2+}] binding scheme ODEs. |